Entries by zu

Conference Announcement | January 12-17, GrandOmics sincerely invites you to participate in the 2024 PAG event!

International Plant & Animal Genome (PAG Conference) is an internationally renowned top academic conference on animal and plant genomics research, held from January 12th to 17th, 2024 in San Diego, CA, USA. The PAG consists of scientific workshops, plenary speakers, industry workshops, digital tools and resources sessions, posters sessions, and exhibits with vendors presenting industry […]

Extensive intraspecific gene order and gene structural variations between Mo17 and other maize genomes

Nature Genetics        Published:30 July 2018 Abstract:Maize is an important crop with a high level of genome diversity and heterosis. The genome sequence of a typical female line, B73,was previously released. Here, we report a de novo genome assembly of a corresponding male representative line, Mo17. More than 96.4% of the 2,183 Mb assembled genome can be accounted for by […]

Adaptation and conservation insights from the koala genome

Nature Genetics    Published: 02 July 2018 Abstract:The koala, the only extant species of the marsupial family Phascolarctidae, is classified as ‘vulnerable’ due to habitat loss and widespread disease. We sequenced the koala genome, producing a complete and contiguous marsupial reference genome, including centromeres. We reveal that the koala’s ability to detoxify eucalypt foliage may be due to expansions within […]

Oak genome reveals facets of long lifespan

Nature Plant       Published: 18 June 2018 Abstract:Oaks are an important part of our natural and cultural heritage. Not only are they ubiquitous in our most common landscapes but they have also supplied human societies with invaluable services, including food and shelter, since prehistoric times. With 450 species spread throughout Asia, Europe and America, oaks constitute a critical global renewable resource. The longevity […]

High-resolution comparative analysis of great ape genomes

Science           08 June 2018 Abstract:Genetic studies of human evolution require high-quality contiguous ape genome assemblies that are not guided by the human reference. We coupled long-read sequence assembly and full-length complementary DNA sequencing with a multiplatform scaffolding approach to produce ab initio chimpanzee and orangutan genome assemblies. By comparing these with two long-read de novo human genome assemblies and a gorilla […]

Genomic variation in 3,010 diverse accessions of Asian cultivated rice

Nature          Published: 25 April 2018 Abstract:Here we analyse genetic variation, population structure and diversity among 3,010 diverse Asian cultivated rice (Oryza sativa L.) genomes from the 3,000 Rice Genomes Project. Our results are consistent with the five major groups previously recognized, but also suggest several unreported subpopulations that correlate with geographic location. We identified 29 million single nucleotide polymorphisms, 2.4 […]